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Microsatellites : methods and protocols / edited by Stella K. Kantartzi.

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Microsatellites or simple sequence repeats (SSRs) have become the markers of choice for a variety of molecular studies because of their versatility, operational flexibility, and lower cost than other marker systems. Microsatellites: Methods and Protocols brings together experts in the field to cover...

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Bibliographic Details
Online Access: Full Text (via Springer)
Other Authors: Kantartzi, Stella K. (Editor)
Format: Electronic eBook
Language:English
Published: New York : Humana Press, [2013]
Series:Methods in molecular biology (Clifton, N.J.) ; v. 1006.
Subjects:
Microsatellites (Genetics)
Table of Contents:
  • Microsatellites : evolution and contribution / Panagiotis Madesis, Ioannis Ganopoulos, and Athanasios Tsaftaris
  • Screening of genomic libraries / Valdenice M. Novelli [and others]
  • PCR-based isolation of microsatellite arrays (PIMA) / Heng-Sheng Lin and Song-Bin Chang
  • Fast isolation by AFLP of sequences containing repeats / Kaisa Rikalainen
  • Microsatellite DNA capture from enriched libraries / Elena G. Gonzalez and Rafael Zardoya
  • Next-generation sequencing for high-throughput molecular ecology : a step-by-step protocol for targeted multilocus genotyping by pyrosequencing / Jonathan B. Puritz and Robert J. Toonen
  • Optimizing selection of microsatellite loci from 454 pyrosequencing via post-sequencing bioinformatic analyses / Iria Fernandez-Silva and Robert J. Toonen
  • Identification of DNA-microsatellite markers for the characterization of somatic embryos in Quercus suber / Arancha Gomez-Garay, Angeles Bueno, and Beatriz Pintos
  • Simple sequence repeats amplification / Kundapura V. Ravishankar and Padmakar Bommisetty
  • Microsatellite amplification in plants : optimization procedure of major PCR components / Sana Ghaffari and Nejib Hasnaoui
  • Development of a multiplex PCR assay for characterization of embryonic stem cells / Rajarshi Pal [and others]
  • Agarose gel electrophoresis and polyacrylamide gel electrophoresis for visualization of simple sequence repeats / James Anderson, Drew Wright, and Khalid Meksem
  • Microsatellite fragment analysis using the ABI PRISM® 377 DNA sequencer / Mark A. Renshaw, Melissa Giresi, and J. Orville Adams
  • Robust and inexpensive SSR markers analyses using LI-COR DNA analyzer / Maria del Rosario Herrera and Marc Ghislain
  • Use of the MegaBACE for sequencing and genotype analysis / Pamela A. Burger
  • Analyzing microsatellites using the QIAxcel system / Deborah A. Dean [and others]
  • Microsatellite analysis of malaria parasites / Pamela Orjuela-Sanchez, Michelle C. Brandi, and Marcelo U. Ferreira
  • Informativeness of Microsatellite Markers / M. Humberto Reyes-Valdes
  • Microsatellite data analysis for population genetics / Kyung Seok Kim and Thomas W. Sappington
  • Molecular mapping and breeding with microsatellite markers / David A. Lightfoot and Muhammad J. Iqbal
  • Scoring microsatellite loci / Lluvia Flores-Renteria and Andrew Krohn.

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