Next-generation sequencing and sequence data analysis / Kuo Ping Chiu.

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Bibliographic Details
Online Access: Full Text (via ProQuest)
Main Author: Ping Chiu, Kuo (Author)
Format: eBook
Language:English
Published: Sharjah : Bentham Science Publisher, [2016]
Subjects:

MARC

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100 1 |a Ping Chiu, Kuo,  |e author. 
245 1 0 |a Next-generation sequencing and sequence data analysis /  |c Kuo Ping Chiu. 
260 |a Sharjah :  |b Bentham Science Publisher,  |c [2016] 
300 |a 1 online resource. 
336 |a text  |b txt  |2 rdacontent. 
337 |a computer  |b c  |2 rdamedia. 
338 |a online resource  |b cr  |2 rdacarrier. 
504 |a Includes bibliographical references and index. 
505 0 |a FOREWORD ; PREFACE ; ACKNOWLEDGEMENTS ; CONFLICT OF INTEREST; Background Introduction ; The Ultimate Frontier of Knowledge: the Myster-ious Genomes and the Gene Expression and Regul-ation in the Upstream of Biological Information Flow ; INTRODUCTION; MICROSCOPIC STRUCTURE AND ORGANIZATION OF INFORMATION MOLECULES; THE STRUCTURE AND ORGANIZATION OF INFORMATION MOLECULES AT THE MOLECULAR LEVEL; DNA is the Most Magnificent Molecule Selected By Evolution ; DNA Packaging; Nucleosome; GENE EXPRESSION AND REGULATION IN THE EUKARYOTIC SYSTEM. 
505 8 |a A. ATP-Dependent and ATP-Independent Chromatin Remodeling EnzymeB. X Chromosome Inactivation; C. Pathway Flow from Extracellular Signal to the Nucleus; D. TFs, Motifs, and DNA-Protein Interaction; E. Transcription Factories (TFs); F. Epigenetic Modifications; G. Alternative Splicing; H. MicroRNA (miRNA); THE BOTTOM LINE; REFERENCES; Evolution of DNA Sequencing Technologies ; INTRODUCTION; CHARACTERISTICS OF DNA SEQUENCING; ADVANCES IN SEQUENCING TECHNOLOGIES; MANUAL SANGER SEQUENCING; AUTOMATED SANGER SEQUENCING ; KEY CHANGES FROM MANUAL TO AUTOMATED SANGER SEQUE-NCING. 
505 8 |a THE NEXT-GENERATION SEQUENCING SINGLE MOLECULE SEQUENCING; REFERENCES; Mechanisms of Next-Generation Sequencing (NGS) ; INTRODUCTION; Changes Made From Automated Sanger Sequencing to Next-Gen Sequencing; In situ PCR for Clonal Amplification of Templates; NGS Sequencing Mechanisms; I. Sequencing-By-Synthesis; Solexa Sequencers Manufactured By Illumina -- HiSeq 2000 as an Example (Fig. 1); Sequencing Library Preparation ; 454 Sequencers By Roche ; Sequencing Library Preparation; Sequencing-By-Synthesis on Picotiter Plate. 
505 8 |a II. Sequencing By Ligation: SOLiD Sequencers (Fig. 8) Manufactured By Life Technologies Inc. REFERENCES; Genome Assembly, the Genomic Era and the Rise of the Omics Era ; INTRODUCTION; PART I. REVIEW OF THE STRATEGIES EMPLOYED FOR GENOME ASSEMBLY; Technological impacts on genome assembly; Next-Generation Sequencing (NGS); Oligo-mediated technologies ; PART II. THE GENOMIC ERA; The Human Genome Project; Genomic Era; Post Genomic Era; KEY EVENTS LEADING TO THE DEVELOPMENT OF THE GENOMIC ERA ; GENERAL PROCEDURE FOR RESEQUENCING; ADVANTAGES OF DIRECT MAPPING AGAINST A REFERENCE (NORMAL) GENOME. 
505 8 |a PART III. THE RISE OF THE OMICS ERAThe Omics Era; REFERENCES; Application of DNA Sequencing in Biological Investigations ; Laboratory Setup and Fundamental Works ; INTRODUCTION; I. WETLAB; Setting up a Wetlab; Protocols to Use; II. DRYLAB ; Setting Up a Drylab; Sequence Data Processing; Methods Used for Sequence Data Processing and Analysis; REFERENCES; Sequencing Libraries and Basic Procedure for Sequencing Library Construction ; INTRODUCTION; CLASSIFICATION OF SEQUENCING LIBRARIES; GENERAL PROCEDURE FOR SEQUENCING LIBRARY CONSTRUCTION. 
588 0 |a Online resource; title from PDF title page (EBSCO, viewed January 25, 2016) 
650 0 |a Machine learning. 
650 0 |a Data mining. 
650 0 |a Computational intelligence. 
650 7 |a Computational intelligence.  |2 fast  |0 (OCoLC)fst00871995. 
650 7 |a Data mining.  |2 fast  |0 (OCoLC)fst00887946. 
650 7 |a Machine learning.  |2 fast  |0 (OCoLC)fst01004795. 
776 0 8 |i Print version:  |a Chiu, Author: Kuo Ping.  |t Next-Generation Sequencing and Sequence Data Analysis.  |d Sharjah : Bentham Science Publishers, ©2015  |z 9781681080932. 
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